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bark protein bark beetle [ Neodiprion lecontei (redheaded pine sawfly) ]

Gene ID: 107222131, updated on 10-Oct-2024

Summary

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Gene symbol
bark
Gene description
protein bark beetle
See related
EnsemblRapid:ENSNLCG00000001279
Gene type
protein coding
RefSeq status
MODEL
Organism
Neodiprion lecontei
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Tenthredinoidea; Diprionidae; Diprioninae; Neodiprion
Orthologs
fruit fly honey bee all
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Genomic context

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See bark in Genome Data Viewer
Location:
chromosome: 3
Exon count:
29
Annotation release Status Assembly Chr Location
101 current iyNeoLeco1.1 (GCF_021901455.1) 3 NC_060262.1 (41064931..41088595)
100 previous assembly Nlec1.0 (GCF_001263575.1) Unplaced Scaffold NW_015384660.1 (135416..158365)

Chromosome 3 - NC_060262.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124293566 Neighboring gene probable ATP-dependent RNA helicase DDX43 Neighboring gene Establishment of cohesion Neighboring gene RYamide receptor-like Neighboring gene stromal membrane-associated protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Support for the adaptive decoupling hypothesis from whole-transcriptome profiles of a hypermetamorphic and sexually dimorphic insect, Neodiprion lecontei. Herrig DK, et al. Mol Ecol, 2021 Sep. PMID 34174126
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein bark beetle

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neodiprion lecontei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iyNeoLeco1.1

Genomic

  1. NC_060262.1 Reference iyNeoLeco1.1

    Range
    41064931..41088595
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046734817.1 → XP_046590773.1  protein bark beetle isoform X6

  2. XM_046734816.1 → XP_046590772.1  protein bark beetle isoform X5

  3. XM_046734813.1 → XP_046590769.1  protein bark beetle isoform X1

  4. XM_046734814.1 → XP_046590770.1  protein bark beetle isoform X2

  5. XM_015661362.2 → XP_015516848.2  protein bark beetle isoform X3

    Related
    ENSNLCP00000001420.1, ENSNLCT00000002264.1

  6. XM_046734815.1 → XP_046590771.1  protein bark beetle isoform X4

    Related
    ENSNLCP00000001435.1, ENSNLCT00000002283.1
Nucleotide Protein
Heading Accession and Version

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