U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

colt carnitine/acylcarnitine carrier protein colt, mitochondrial [ Neodiprion lecontei (redheaded pine sawfly) ]

Gene ID: 107221680, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
colt
Gene description
carnitine/acylcarnitine carrier protein colt, mitochondrial
See related
EnsemblRapid:ENSNLCG00000012573
Gene type
protein coding
RefSeq status
MODEL
Organism
Neodiprion lecontei
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Tenthredinoidea; Diprionidae; Diprioninae; Neodiprion
Orthologs
fruit fly honey bee all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See colt in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
101 current iyNeoLeco1.1 (GCF_021901455.1) 5 NC_060264.1 (30287430..30293407)
100 previous assembly Nlec1.0 (GCF_001263575.1) Unplaced Scaffold NW_015384316.1 (118228..123515)

Chromosome 5 - NC_060264.1Genomic Context describing neighboring genes Neighboring gene Structural maintenance of chromosomes 6 Neighboring gene Crk proto-oncogene, adaptor protein Neighboring gene AMP-activated protein kinase alpha subunit Neighboring gene carboxypeptidase N subunit 2-like Neighboring gene WASH complex subunit 1 Neighboring gene SET and MYND domain-containing protein 4 Neighboring gene dynamin related protein 1 Neighboring gene Vacuolar H[+] ATPase PPA1 subunit 1 Neighboring gene Carnitine palmitoyltransferase 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
congested-like trachea protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Neodiprion lecontei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iyNeoLeco1.1

Genomic

  1. NC_060264.1 Reference iyNeoLeco1.1

    Range
    30287430..30293407
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015660759.2 → XP_015516245.1  congested-like trachea protein

    UniProtKB/TrEMBL
    A0A6J0BNU7
    Related
    ENSNLCP00000023727.1, ENSNLCT00000027011.1
    Conserved Domains (2) summary
    PTZ00168
    Location:8 → 281
    PTZ00168; mitochondrial carrier protein; Provisional
    pfam00153
    Location:103 → 198
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases