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LOC107220083 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 [ Neodiprion lecontei (redheaded pine sawfly) ]

Gene ID: 107220083, updated on 1-Oct-2024

Summary

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Gene symbol
LOC107220083
Gene description
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1
See related
EnsemblRapid:ENSNLCG00000001452
Gene type
protein coding
RefSeq status
MODEL
Organism
Neodiprion lecontei
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Tenthredinoidea; Diprionidae; Diprioninae; Neodiprion
Orthologs
honey bee all
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Genomic context

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See LOC107220083 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
101 current iyNeoLeco1.1 (GCF_021901455.1) 3 NC_060262.1 (386397..388762, complement)
100 previous assembly Nlec1.0 (GCF_001263575.1) Unplaced Scaffold NW_015383338.1 (120562..122701, complement)

Chromosome 3 - NC_060262.1Genomic Context describing neighboring genes Neighboring gene 4-hydroxybutyrate coenzyme A transferase Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene uncharacterized LOC107220085 Neighboring gene uncharacterized LOC107220094

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Support for the adaptive decoupling hypothesis from whole-transcriptome profiles of a hypermetamorphic and sexually dimorphic insect, Neodiprion lecontei. Herrig DK, et al. Mol Ecol, 2021 Sep. PMID 34174126
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neodiprion lecontei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iyNeoLeco1.1

Genomic

  1. NC_060262.1 Reference iyNeoLeco1.1

    Range
    386397..388762 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015658511.2 → XP_015513997.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1

    UniProtKB/TrEMBL
    A0A6J0BIE9
    Related
    ENSNLCP00000001679.1, ENSNLCT00000002557.1
    Conserved Domains (1) summary
    cd00143
    Location:53 → 366
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
Nucleotide Protein
Heading Accession and Version

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