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CERS5 ceramide synthase 5 [ Parus major (Great Tit) ]

Gene ID: 107215686, updated on 3-Aug-2024

Summary

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Gene symbol
CERS5
Gene description
ceramide synthase 5
See related
Ensembl:ENSPMJG00000013252
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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See CERS5 in Genome Data Viewer
Location:
chromosome: LGE22
Exon count:
12
Annotation release Status Assembly LG Location
102 current Parus_major1.1 (GCF_001522545.3) LGE22 NC_031798.1 (91268..109866, complement)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) Chromosome LGE22 NC_029298.1 (91268..109866, complement)

Linkage Group LGE22 - NC_031798.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase assembly protein COX14 homolog Neighboring gene glycerol-3-phosphate dehydrogenase 1 Neighboring gene LIM domain and actin binding 1 Neighboring gene La ribonucleoprotein 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingosine N-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide synthase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031798.1 Reference Parus_major1.1 Primary Assembly

    Range
    91268..109866 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015652060.1 → XP_015507546.1  ceramide synthase 5 isoform X2

    Conserved Domains (2) summary
    cd00086
    Location:52 → 99
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam03798
    Location:103 → 296
    TRAM_LAG1_CLN8; TLC domain

  2. XM_015652059.1 → XP_015507545.1  ceramide synthase 5 isoform X1

    Related
    ENSPMJP00000017635.1, ENSPMJT00000023059.1
    Conserved Domains (2) summary
    cd00086
    Location:90 → 137
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam03798
    Location:141 → 334
    TRAM_LAG1_CLN8; TLC domain

RNA

  1. XR_001525201.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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