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H6PD hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase [ Parus major (Great Tit) ]

Gene ID: 107213774, updated on 3-Aug-2024

Summary

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Gene symbol
H6PD
Gene description
hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase
See related
Ensembl:ENSPMJG00000014815
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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See H6PD in Genome Data Viewer
Location:
chromosome: 21
Exon count:
7
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 21 NC_031789.1 (6880013..6890436)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 21 NC_029289.1 (6880031..6890439)

Chromosome 21 - NC_031789.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 2, facilitated glucose transporter member 5 Neighboring gene G protein-coupled receptor 157 Neighboring gene splA/ryanodine receptor domain and SOCS box containing 1 Neighboring gene solute carrier family 25 member 33

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 6-phosphogluconolactonase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glucose-6-phosphate dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt, oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDH/6PGL endoplasmic bifunctional protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031789.1 Reference Parus_major1.1 Primary Assembly

    Range
    6880013..6890436
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033519277.1 → XP_033375168.1  GDH/6PGL endoplasmic bifunctional protein

    Conserved Domains (2) summary
    PTZ00309
    Location:15 → 505
    PTZ00309; glucose-6-phosphate 1-dehydrogenase; Provisional
    cl00339
    Location:555 → 787
    SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...

  2. XM_015648567.3 → XP_015504053.1  GDH/6PGL endoplasmic bifunctional protein

    Related
    ENSPMJP00000019851.1, ENSPMJT00000025893.1
    Conserved Domains (2) summary
    PTZ00309
    Location:15 → 505
    PTZ00309; glucose-6-phosphate 1-dehydrogenase; Provisional
    cl00339
    Location:555 → 787
    SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...
Nucleotide Protein
Heading Accession and Version

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