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LMAN2 lectin, mannose binding 2 [ Parus major (Great Tit) ]

Gene ID: 107210522, updated on 3-Aug-2024

Summary

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Gene symbol
LMAN2
Gene description
lectin, mannose binding 2
See related
Ensembl:ENSPMJG00000006590
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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See LMAN2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
8
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 13 NC_031782.1 (3168740..3172452, complement)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 13 NC_029282.1 (3168740..3172448, complement)

Chromosome 13 - NC_031782.1Genomic Context describing neighboring genes Neighboring gene NEDD4 binding protein 3 Neighboring gene beta-1,4-galactosyltransferase 7 Neighboring gene ADP-ribosylation factor-like protein 3 Neighboring gene regulator of G protein signaling 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vesicular integral-membrane protein VIP36

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031782.1 Reference Parus_major1.1 Primary Assembly

    Range
    3168740..3172452 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033517706.1 → XP_033373597.1  vesicular integral-membrane protein VIP36 isoform X2

    Conserved Domains (1) summary
    cl14058
    Location:35 → 229
    lectin_L-type; legume lectins

  2. XM_015641447.3 → XP_015496933.1  vesicular integral-membrane protein VIP36 isoform X1

    Related
    ENSPMJP00000008072.1, ENSPMJT00000011046.1
    Conserved Domains (1) summary
    cd06901
    Location:35 → 283
    lectin_VIP36_VIPL; VIP36 and VIPL type 1 transmembrane proteins, lectin domain
Nucleotide Protein
Heading Accession and Version

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