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GALK2 galactokinase 2 [ Parus major (Great Tit) ]

Gene ID: 107209247, updated on 3-Aug-2024

Summary

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Gene symbol
GALK2
Gene description
galactokinase 2
See related
Ensembl:ENSPMJG00000019184
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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See GALK2 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 10 NC_031779.1 (9862823..9911092)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 10 NC_029279.1 (9862760..9910950)

Chromosome 10 - NC_031779.1Genomic Context describing neighboring genes Neighboring gene SECIS binding protein 2 like Neighboring gene COP9 signalosome subunit 2 Neighboring gene fibroblast growth factor 7 Neighboring gene uncharacterized LOC117244953 Neighboring gene DTW domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables galactokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in galactose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylgalactosamine kinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031779.1 Reference Parus_major1.1 Primary Assembly

    Range
    9862823..9911092
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015638639.3 → XP_015494125.1  N-acetylgalactosamine kinase isoform X2

    Conserved Domains (1) summary
    cl26519
    Location:2 → 431
    GalKase_gal_bdg; Galactokinase galactose-binding signature

  2. XM_015638638.3 → XP_015494124.1  N-acetylgalactosamine kinase isoform X1

    Related
    ENSPMJP00000026243.1, ENSPMJT00000033791.1
    Conserved Domains (3) summary
    PLN02521
    Location:15 → 455
    PLN02521; galactokinase
    pfam08544
    Location:350 → 430
    GHMP_kinases_C; GHMP kinases C terminal
    pfam10509
    Location:24 → 73
    GalKase_gal_bdg; Galactokinase galactose-binding signature
Nucleotide Protein
Heading Accession and Version

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