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CRYL1 crystallin lambda 1 [ Parus major (Great Tit) ]

Gene ID: 107209122, updated on 3-Aug-2024

Summary

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Gene symbol
CRYL1
Gene description
crystallin lambda 1
See related
Ensembl:ENSPMJG00000017605
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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See CRYL1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 1 NC_031768.1 (71176659..71226937)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 1 NC_029268.1 (71176659..71226937)

Chromosome 1 - NC_031768.1Genomic Context describing neighboring genes Neighboring gene interleukin 17D Neighboring gene intraflagellar transport 88 Neighboring gene uncharacterized LOC117244643 Neighboring gene gap junction beta-2 protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-gulonate 3-dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NAD+ binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lambda-crystallin homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031768.1 Reference Parus_major1.1 Primary Assembly

    Range
    71176659..71226937
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015638409.1 → XP_015493895.1  lambda-crystallin homolog

    Related
    ENSPMJP00000023895.1, ENSPMJT00000030963.1
    Conserved Domains (3) summary
    PRK06129
    Location:2 → 310
    PRK06129; 3-hydroxyacyl-CoA dehydrogenase; Validated
    pfam00725
    Location:189 → 241
    3HCDH; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
    pfam02737
    Location:5 → 184
    3HCDH_N; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Nucleotide Protein
Heading Accession and Version

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