U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) [ Parus major (Great Tit) ]

Gene ID: 107208685, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
B3GALNT1
Gene description
beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See B3GALNT1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 9 NC_031778.1 (23358983..23364376, complement)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 9 NC_029278.1 (23358977..23364373, complement)

Chromosome 9 - NC_031778.1Genomic Context describing neighboring genes Neighboring gene serine palmitoyltransferase small subunit B-like Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1L Neighboring gene ARF like GTPase 14 Neighboring gene small Cajal body-specific RNA 7 Neighboring gene karyopherin subunit alpha 4

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031778.1 Reference Parus_major1.1 Primary Assembly

    Range
    23358983..23364376 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015637337.3 → XP_015492823.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    cl21608
    Location:88 → 281
    Galactosyl_T; Galactosyltransferase

  2. XM_015637341.3 → XP_015492827.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    cl21608
    Location:88 → 281
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.