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INPP5D inositol polyphosphate-5-phosphatase D [ Parus major (Great Tit) ]

Gene ID: 107208645, updated on 3-Aug-2024

Summary

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Gene symbol
INPP5D
Gene description
inositol polyphosphate-5-phosphatase D
See related
Ensembl:ENSPMJG00000017097
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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See INPP5D in Genome Data Viewer
Location:
chromosome: 9
Exon count:
30
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 9 NC_031778.1 (6232399..6290519)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 9 NC_029278.1 (6232399..6292648)

Chromosome 9 - NC_031778.1Genomic Context describing neighboring genes Neighboring gene secondary ossification center associated regulator of chondrocyte maturation Neighboring gene neuronal guanine nucleotide exchange factor Neighboring gene neuraminidase 2 Neighboring gene small Cajal body-specific RNA 6 Neighboring gene autophagy related 16 like 1 Neighboring gene small Cajal body-specific RNA 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031778.1 Reference Parus_major1.1 Primary Assembly

    Range
    6232399..6290519
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015637175.1 → XP_015492661.1  phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 isoform X1

    Related
    ENSPMJP00000023122.1, ENSPMJT00000030049.1
    Conserved Domains (2) summary
    cd09100
    Location:403 → 709
    INPP5c_SHIP1-INPP5D; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol polyphosphate 5-phosphatase-1 and related proteins
    cd10343
    Location:1 → 103
    SH2_SHIP; Src homology 2 (SH2) domain found in SH2-containing inositol-5'-phosphatase (SHIP) and SLAM-associated protein (SAP)

  2. XM_033516875.1 → XP_033372766.1  phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 isoform X2

    Conserved Domains (2) summary
    cd09100
    Location:382 → 688
    INPP5c_SHIP1-INPP5D; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol polyphosphate 5-phosphatase-1 and related proteins
    cl15255
    Location:25 → 82
    SH2; Src homology 2 (SH2) domain
Nucleotide Protein
Heading Accession and Version

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