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XXYLT1 xyloside xylosyltransferase 1 [ Parus major (Great Tit) ]

Gene ID: 107208582, updated on 3-Aug-2024

Summary

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Gene symbol
XXYLT1
Gene description
xyloside xylosyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See XXYLT1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 9 NC_031778.1 (12982567..13015771)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 9 NC_029278.1 (12982567..13015593)

Chromosome 9 - NC_031778.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1 regulatory inhibitor subunit 2 Neighboring gene ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 Neighboring gene family with sequence similarity 43 member A Neighboring gene large 60S subunit nuclear export GTPase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xyloside xylosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031778.1 Reference Parus_major1.1 Primary Assembly

    Range
    12982567..13015771
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015637079.2 → XP_015492565.1  xyloside xylosyltransferase 1

    Conserved Domains (2) summary
    COG1442
    Location:141 → 272
    RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]
    cl11394
    Location:36 → 302
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
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