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B4GALT2 beta-1,4-galactosyltransferase 2 [ Parus major (Great Tit) ]

Gene ID: 107208264, updated on 3-Aug-2024

Summary

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Gene symbol
B4GALT2
Gene description
beta-1,4-galactosyltransferase 2
See related
Ensembl:ENSPMJG00000019507
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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See B4GALT2 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 8 NC_031777.1 (21048103..21055411)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 8 NC_029277.1 (17946919..17953520, complement)

Chromosome 8 - NC_031777.1Genomic Context describing neighboring genes Neighboring gene diphthamide biosynthesis 2 Neighboring gene ATPase H+ transporting V0 subunit b Neighboring gene solute carrier family 6 member 9 Neighboring gene Krueppel-like factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031777.1 Reference Parus_major1.1 Primary Assembly

    Range
    21048103..21055411
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033516422.1 → XP_033372313.1  beta-1,4-galactosyltransferase 2

    Related
    ENSPMJP00000026753.1, ENSPMJT00000034435.1
    Conserved Domains (2) summary
    cd00899
    Location:143 → 362
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
    PHA03270
    Location:51 → 134
    PHA03270; envelope glycoprotein C; Provisional

  2. XM_015636473.3 → XP_015491959.1  beta-1,4-galactosyltransferase 2

    Conserved Domains (2) summary
    cd00899
    Location:143 → 362
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
    PHA03270
    Location:51 → 134
    PHA03270; envelope glycoprotein C; Provisional

  3. XM_033516421.1 → XP_033372312.1  beta-1,4-galactosyltransferase 2

    Conserved Domains (2) summary
    cd00899
    Location:143 → 362
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
    PHA03270
    Location:51 → 134
    PHA03270; envelope glycoprotein C; Provisional
Nucleotide Protein
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