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ST6GALNAC3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [ Parus major (Great Tit) ]

Gene ID: 107208224, updated on 3-Aug-2024

Summary

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Gene symbol
ST6GALNAC3
Gene description
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
See related
Ensembl:ENSPMJG00000019478
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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See ST6GALNAC3 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
7
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 8 NC_031777.1 (19913302..20133096, complement)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 8 NC_029277.1 (18869124..19089032)

Chromosome 8 - NC_031777.1Genomic Context describing neighboring genes Neighboring gene adenylate kinase 5 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class K Neighboring gene uncharacterized LOC107208000 Neighboring gene ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 Neighboring gene uncharacterized LOC107208226 Neighboring gene EBNA1 binding protein 2 Neighboring gene cilia and flagella associated protein 144 Neighboring gene PIF1 5'-to-3' DNA helicase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031777.1 Reference Parus_major1.1 Primary Assembly

    Range
    19913302..20133096 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015636368.2 → XP_015491854.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 isoform X1

    Related
    ENSPMJP00000026692.1, ENSPMJT00000034373.1
    Conserved Domains (1) summary
    pfam00777
    Location:70 → 295
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_033516553.1 → XP_033372444.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 isoform X2

    Conserved Domains (1) summary
    pfam00777
    Location:99 → 324
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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