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SOAT1 sterol O-acyltransferase 1 [ Parus major (Great Tit) ]

Gene ID: 107208206, updated on 3-Aug-2024

Summary

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Gene symbol
SOAT1
Gene description
sterol O-acyltransferase 1
See related
Ensembl:ENSPMJG00000018699
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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See SOAT1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
17
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 8 NC_031777.1 (2789927..2816220, complement)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 8 NC_029277.1 (2789121..2816245, complement)

Chromosome 8 - NC_031777.1Genomic Context describing neighboring genes Neighboring gene tudor domain containing 5 Neighboring gene NPHS2 stomatin family member, podocin Neighboring gene ABL proto-oncogene 2, non-receptor tyrosine kinase Neighboring gene torsin family 3 member A Neighboring gene FAM20B glycosaminoglycan xylosylkinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cholesterol O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cholesterol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty-acyl-CoA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol efflux IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sterol O-acyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031777.1 Reference Parus_major1.1 Primary Assembly

    Range
    2789927..2816220 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015636324.3 → XP_015491810.1  sterol O-acyltransferase 1

    Conserved Domains (1) summary
    cl00738
    Location:219 → 521
    MBOAT; MBOAT, membrane-bound O-acyltransferase family

  2. XM_015636322.2 → XP_015491808.1  sterol O-acyltransferase 1

    Related
    ENSPMJP00000025540.1, ENSPMJT00000032955.1
    Conserved Domains (1) summary
    cl00738
    Location:219 → 521
    MBOAT; MBOAT, membrane-bound O-acyltransferase family

  3. XM_015636323.2 → XP_015491809.1  sterol O-acyltransferase 1

    Conserved Domains (1) summary
    cl00738
    Location:219 → 521
    MBOAT; MBOAT, membrane-bound O-acyltransferase family
Nucleotide Protein
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