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GALNT3 polypeptide N-acetylgalactosaminyltransferase 3 [ Parus major (Great Tit) ]

Gene ID: 107207524, updated on 3-Aug-2024

Summary

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Gene symbol
GALNT3
Gene description
polypeptide N-acetylgalactosaminyltransferase 3
See related
Ensembl:ENSPMJG00000019119
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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See GALNT3 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
15
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 7 NC_031776.1 (19370159..19393430)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 7 NC_029276.1 (19370161..19392387)

Chromosome 7 - NC_031776.1Genomic Context describing neighboring genes Neighboring gene sodium channel protein type 1 subunit alpha Neighboring gene tetratricopeptide repeat domain 21B Neighboring gene cysteine and serine rich nuclear protein 3 Neighboring gene sodium voltage-gated channel alpha subunit 2 Neighboring gene sodium channel protein type 2 subunit alpha-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031776.1 Reference Parus_major1.1 Primary Assembly

    Range
    19370159..19393430
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015634795.2 → XP_015490281.1  polypeptide N-acetylgalactosaminyltransferase 3

    Conserved Domains (3) summary
    cd02510
    Location:186 → 491
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:505 → 627
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:503 → 625
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_015634793.2 → XP_015490279.1  polypeptide N-acetylgalactosaminyltransferase 3

    Related
    ENSPMJP00000026137.1, ENSPMJT00000033670.1
    Conserved Domains (3) summary
    cd02510
    Location:186 → 491
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:505 → 627
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:503 → 625
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  3. XM_015634797.2 → XP_015490283.1  polypeptide N-acetylgalactosaminyltransferase 3

    Related
    ENSPMJP00000026138.1, ENSPMJT00000033671.1
    Conserved Domains (3) summary
    cd02510
    Location:186 → 491
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:505 → 627
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:503 → 625
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  4. XM_015634794.3 → XP_015490280.1  polypeptide N-acetylgalactosaminyltransferase 3

    Related
    ENSPMJP00000026139.1, ENSPMJT00000033672.1
    Conserved Domains (3) summary
    cd02510
    Location:186 → 491
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:505 → 627
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:503 → 625
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  5. XM_015634798.3 → XP_015490284.1  polypeptide N-acetylgalactosaminyltransferase 3

    Conserved Domains (3) summary
    cd02510
    Location:186 → 491
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:505 → 627
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:503 → 625
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

RNA

  1. XR_001522784.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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