U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CHKA choline kinase alpha [ Parus major (Great Tit) ]

Gene ID: 107206096, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CHKA
Gene description
choline kinase alpha
See related
Ensembl:ENSPMJG00000009865
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Parus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CHKA in Genome Data Viewer
Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 5 NC_031774.1 (17664450..17686445, complement)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 5 NC_029274.1 (17664450..17686445, complement)

Chromosome 5 - NC_031774.1Genomic Context describing neighboring genes Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene ribonuclease/angiogenin inhibitor 1 Neighboring gene uncharacterized LOC107205913 Neighboring gene lysine methyltransferase 5B

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ethanolamine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in CDP-choline pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylethanolamine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
choline kinase alpha

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031774.1 Reference Parus_major1.1 Primary Assembly

    Range
    17664450..17686445 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015631550.3 → XP_015487036.1  choline kinase alpha isoform X2

    Related
    ENSPMJP00000012882.1, ENSPMJT00000016933.1
    Conserved Domains (2) summary
    PLN02236
    Location:86 → 424
    PLN02236; choline kinase
    cd05156
    Location:98 → 421
    ChoK_euk; Euykaryotic Choline Kinase

  2. XM_015631549.3 → XP_015487035.1  choline kinase alpha isoform X1

    Related
    ENSPMJP00000012878.1, ENSPMJT00000016929.1
    Conserved Domains (2) summary
    PLN02236
    Location:86 → 442
    PLN02236; choline kinase
    cd05156
    Location:98 → 439
    ChoK_euk; Euykaryotic Choline Kinase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.