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B4GALT4 beta-1,4-galactosyltransferase 4 [ Parus major (Great Tit) ]

Gene ID: 107205999, updated on 3-Aug-2024

Summary

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Gene symbol
B4GALT4
Gene description
beta-1,4-galactosyltransferase 4
See related
Ensembl:ENSPMJG00000010774
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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See B4GALT4 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 1 NC_031768.1 (90156404..90183957)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 1 NC_029268.1 (90156406..90183957)

Chromosome 1 - NC_031768.1Genomic Context describing neighboring genes Neighboring gene fatty acid amide hydrolase-like Neighboring gene transmembrane protein 39A Neighboring gene beta-1,4-galactosyltransferase 3 Neighboring gene galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031768.1 Reference Parus_major1.1 Primary Assembly

    Range
    90156404..90183957
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015631248.3 → XP_015486734.1  beta-1,4-galactosyltransferase 4 isoform X1

    Related
    ENSPMJP00000014209.1, ENSPMJT00000018588.1
    Conserved Domains (1) summary
    cd00899
    Location:127 → 344
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  2. XM_015631291.3 → XP_015486777.1  beta-1,4-galactosyltransferase 4 isoform X1

    Conserved Domains (1) summary
    cd00899
    Location:127 → 344
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  3. XM_015631272.3 → XP_015486758.1  beta-1,4-galactosyltransferase 4 isoform X1

    Related
    ENSPMJP00000014208.1, ENSPMJT00000018587.1
    Conserved Domains (1) summary
    cd00899
    Location:127 → 344
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  4. XM_015631219.3 → XP_015486705.1  beta-1,4-galactosyltransferase 4 isoform X1

    Conserved Domains (1) summary
    cd00899
    Location:127 → 344
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  5. XM_033517433.1 → XP_033373324.1  beta-1,4-galactosyltransferase 4 isoform X3

    Conserved Domains (1) summary
    cd00899
    Location:127 → 277
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  6. XM_033517426.1 → XP_033373317.1  beta-1,4-galactosyltransferase 4 isoform X2

    Related
    ENSPMJP00000014210.1, ENSPMJT00000018589.1
    Conserved Domains (1) summary
    cl11394
    Location:127 → 303
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  7. XM_015631208.3 → XP_015486694.1  beta-1,4-galactosyltransferase 4 isoform X1

    Conserved Domains (1) summary
    cd00899
    Location:127 → 344
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  8. XM_015631254.3 → XP_015486740.1  beta-1,4-galactosyltransferase 4 isoform X1

    Conserved Domains (1) summary
    cd00899
    Location:127 → 344
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  9. XM_015631262.3 → XP_015486748.1  beta-1,4-galactosyltransferase 4 isoform X1

    Conserved Domains (1) summary
    cd00899
    Location:127 → 344
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  10. XM_015631229.3 → XP_015486715.1  beta-1,4-galactosyltransferase 4 isoform X1

    Related
    ENSPMJP00000014207.1, ENSPMJT00000018586.1
    Conserved Domains (1) summary
    cd00899
    Location:127 → 344
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  11. XM_015631237.3 → XP_015486723.1  beta-1,4-galactosyltransferase 4 isoform X1

    Conserved Domains (1) summary
    cd00899
    Location:127 → 344
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  12. XM_015631281.3 → XP_015486767.1  beta-1,4-galactosyltransferase 4 isoform X1

    Conserved Domains (1) summary
    cd00899
    Location:127 → 344
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

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