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CLEC14A C-type lectin domain containing 14A [ Parus major (Great Tit) ]

Gene ID: 107205373, updated on 3-Aug-2024

Summary

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Gene symbol
CLEC14A
Gene description
C-type lectin domain containing 14A
See related
Ensembl:ENSPMJG00000016681
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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See CLEC14A in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 5 NC_031774.1 (38268963..38270849, complement)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 5 NC_029274.1 (38269539..38270849, complement)

Chromosome 5 - NC_031774.1Genomic Context describing neighboring genes Neighboring gene DNA (cytosine-5)-methyltransferase 3A-like Neighboring gene somatostatin receptor 1 Neighboring gene uncharacterized LOC107205672 Neighboring gene SEC23 homolog A, COPII coat complex component

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables extracellular matrix protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 14 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031774.1 Reference Parus_major1.1 Primary Assembly

    Range
    38268963..38270849 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015629693.3 → XP_015485179.1  C-type lectin domain family 14 member A

    Related
    ENSPMJP00000022532.1, ENSPMJT00000029289.1
    Conserved Domains (1) summary
    cl02432
    Location:34 → 177
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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