U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PLA2G6 phospholipase A2 group VI [ Parus major (Great Tit) ]

Gene ID: 107205116, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
PLA2G6
Gene description
phospholipase A2 group VI
See related
Ensembl:ENSPMJG00000007881
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Parus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PLA2G6 in Genome Data Viewer
Location:
chromosome: 1A
Exon count:
16
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 1A NC_031773.1 (48806210..48820832)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 1A NC_029273.1 (48806203..48820822)

Chromosome 1A - NC_031773.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 184B Neighboring gene MAF bZIP transcription factor F Neighboring gene BAR/IMD domain containing adaptor protein 2 like 2 Neighboring gene solute carrier family 16 member 8

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-independent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiolipin acyl-chain remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
85/88 kDa calcium-independent phospholipase A2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031773.1 Reference Parus_major1.1 Primary Assembly

    Range
    48806210..48820832
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015629302.3 → XP_015484788.1  85/88 kDa calcium-independent phospholipase A2 isoform X2

    Related
    ENSPMJP00000009914.1, ENSPMJT00000013272.1
    Conserved Domains (5) summary
    cd07212
    Location:429 → 742
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    cd00204
    Location:284 → 392
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:120 → 172
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:315 → 346
    ANK; ANK repeat [structural motif]

  2. XM_015629301.3 → XP_015484787.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    Related
    ENSPMJP00000009913.1, ENSPMJT00000013271.1
    Conserved Domains (5) summary
    cd07212
    Location:480 → 793
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    cd00204
    Location:284 → 405
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:120 → 172
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:315 → 346
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.