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CHPT1 choline phosphotransferase 1 [ Parus major (Great Tit) ]

Gene ID: 107204414, updated on 3-Aug-2024

Summary

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Gene symbol
CHPT1
Gene description
choline phosphotransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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See CHPT1 in Genome Data Viewer
Location:
chromosome: 1A
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 1A NC_031773.1 (53323085..53344041, complement)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 1A NC_029273.1 (53322483..53344370, complement)

Chromosome 1A - NC_031773.1Genomic Context describing neighboring genes Neighboring gene DNA damage regulated autophagy modulator 1 Neighboring gene N-acetylglucosamine-1-phosphate transferase subunits alpha and beta Neighboring gene synaptonemal complex protein 3 Neighboring gene myosin binding protein C1 Neighboring gene Spi-C transcription factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables diacylglycerol cholinephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ethanolaminephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylethanolamine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cholinephosphotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031773.1 Reference Parus_major1.1 Primary Assembly

    Range
    53323085..53344041 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015627480.3 → XP_015482966.1  cholinephosphotransferase 1 isoform X1

    Conserved Domains (1) summary
    cl00453
    Location:11 → 327
    CDP-OH_P_transf; CDP-alcohol phosphatidyltransferase

  2. XM_015627483.3 → XP_015482969.1  cholinephosphotransferase 1 isoform X2

    Conserved Domains (1) summary
    cl00453
    Location:11 → 327
    CDP-OH_P_transf; CDP-alcohol phosphatidyltransferase
Nucleotide Protein
Heading Accession and Version

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