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MTMR1 myotubularin related protein 1 [ Parus major (Great Tit) ]

Gene ID: 107203728, updated on 3-Aug-2024

Summary

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Gene symbol
MTMR1
Gene description
myotubularin related protein 1
See related
Ensembl:ENSPMJG00000011425
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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See MTMR1 in Genome Data Viewer
Location:
chromosome: 4A
Exon count:
20
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 4A NC_031772.1 (12621069..12693950, complement)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 4A NC_029272.1 (12621069..12693977, complement)

Chromosome 4A - NC_031772.1Genomic Context describing neighboring genes Neighboring gene high mobility group box 3 Neighboring gene uncharacterized LOC117244376 Neighboring gene uncharacterized LOC117244377 Neighboring gene CD99 molecule like 2 Neighboring gene myotubularin 1 Neighboring gene mastermind like domain containing 1 Neighboring gene uncharacterized LOC107203737

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myotubularin-related protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031772.1 Reference Parus_major1.1 Primary Assembly

    Range
    12621069..12693950 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015626083.3 → XP_015481569.1  myotubularin-related protein 1 isoform X6

    Conserved Domains (2) summary
    cd13358
    Location:101 → 200
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:207 → 542
    Myotub-related; Myotubularin-like phosphatase domain

  2. XM_015626079.3 → XP_015481565.1  myotubularin-related protein 1 isoform X4

    Conserved Domains (2) summary
    cd13358
    Location:118 → 217
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:224 → 559
    Myotub-related; Myotubularin-like phosphatase domain

  3. XM_015626081.3 → XP_015481567.1  myotubularin-related protein 1 isoform X5

    Conserved Domains (2) summary
    cd13358
    Location:109 → 208
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:215 → 550
    Myotub-related; Myotubularin-like phosphatase domain

  4. XM_015626075.3 → XP_015481561.1  myotubularin-related protein 1 isoform X2

    Conserved Domains (2) summary
    cd13358
    Location:126 → 225
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:232 → 567
    Myotub-related; Myotubularin-like phosphatase domain

  5. XM_015626073.3 → XP_015481559.1  myotubularin-related protein 1 isoform X1

    Conserved Domains (2) summary
    cd13358
    Location:127 → 226
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:233 → 568
    Myotub-related; Myotubularin-like phosphatase domain

  6. XM_033514163.1 → XP_033370054.1  myotubularin-related protein 1 isoform X8

    Conserved Domains (2) summary
    cd13358
    Location:127 → 226
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:245 → 569
    Myotub-related; Myotubularin-like phosphatase domain

  7. XM_015626089.2 → XP_015481575.1  myotubularin-related protein 1 isoform X9

    Conserved Domains (2) summary
    cd13358
    Location:13 → 112
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:119 → 454
    Myotub-related; Myotubularin-like phosphatase domain

  8. XM_015626088.2 → XP_015481574.1  myotubularin-related protein 1 isoform X9

    Conserved Domains (2) summary
    cd13358
    Location:13 → 112
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:119 → 454
    Myotub-related; Myotubularin-like phosphatase domain

  9. XM_015626087.2 → XP_015481573.1  myotubularin-related protein 1 isoform X9

    Conserved Domains (2) summary
    cd13358
    Location:13 → 112
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:119 → 454
    Myotub-related; Myotubularin-like phosphatase domain

  10. XM_015626084.3 → XP_015481570.2  myotubularin-related protein 1 isoform X3

    Related
    ENSPMJP00000015076.1, ENSPMJT00000019786.1
    Conserved Domains (2) summary
    cd13358
    Location:13 → 112
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:131 → 455
    Myotub-related; Myotubularin-like phosphatase domain

  11. XM_015626080.3 → XP_015481566.2  myotubularin-related protein 1 isoform X3

    Related
    ENSPMJP00000015078.1, ENSPMJT00000019788.1
    Conserved Domains (2) summary
    cd13358
    Location:13 → 112
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:131 → 455
    Myotub-related; Myotubularin-like phosphatase domain

  12. XM_015626082.3 → XP_015481568.2  myotubularin-related protein 1 isoform X3

    Related
    ENSPMJP00000015075.1, ENSPMJT00000019785.1
    Conserved Domains (2) summary
    cd13358
    Location:13 → 112
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:131 → 455
    Myotub-related; Myotubularin-like phosphatase domain

  13. XM_033514161.1 → XP_033370052.1  myotubularin-related protein 1 isoform X3

    Related
    ENSPMJP00000015077.1, ENSPMJT00000019787.1
    Conserved Domains (2) summary
    cd13358
    Location:13 → 112
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:131 → 455
    Myotub-related; Myotubularin-like phosphatase domain

  14. XM_033514160.1 → XP_033370051.1  myotubularin-related protein 1 isoform X3

    Conserved Domains (2) summary
    cd13358
    Location:13 → 112
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:131 → 455
    Myotub-related; Myotubularin-like phosphatase domain

  15. XM_033514162.1 → XP_033370053.1  myotubularin-related protein 1 isoform X7

    Conserved Domains (2) summary
    cd13358
    Location:127 → 226
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:245 → 569
    Myotub-related; Myotubularin-like phosphatase domain
Nucleotide Protein
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