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SCD5 stearoyl-CoA desaturase 5 [ Parus major (Great Tit) ]

Gene ID: 107203089, updated on 3-Aug-2024

Summary

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Gene symbol
SCD5
Gene description
stearoyl-CoA desaturase 5
See related
Ensembl:ENSPMJG00000008889
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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See SCD5 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 4 NC_031771.1 (13755715..13785930)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 4 NC_029271.1 (13761179..13785925)

Chromosome 4 - NC_031771.1Genomic Context describing neighboring genes Neighboring gene lin-54 DREAM MuvB core complex component Neighboring gene THAP domain containing 9 Neighboring gene SEC31 homolog A, COPII coat complex component Neighboring gene transmembrane protein 150C Neighboring gene enolase-phosphatase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
stearoyl-CoA desaturase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031771.1 Reference Parus_major1.1 Primary Assembly

    Range
    13755715..13785930
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015624557.3 → XP_015480043.2  stearoyl-CoA desaturase 5

    Related
    ENSPMJP00000011474.1, ENSPMJT00000015127.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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