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GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 [ Parus major (Great Tit) ]

Gene ID: 107202191, updated on 3-Aug-2024

Summary

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Gene symbol
GALNT2
Gene description
polypeptide N-acetylgalactosaminyltransferase 2
See related
Ensembl:ENSPMJG00000002730
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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See GALNT2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
17
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 3 NC_031770.1 (41808730..41898393, complement)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 3 NC_029270.1 (41811127..41898394, complement)

Chromosome 3 - NC_031770.1Genomic Context describing neighboring genes Neighboring gene putative HTLV-1-related endogenous sequence Neighboring gene piggyBac transposable element derived 5 Neighboring gene URB2 ribosome biogenesis homolog Neighboring gene TATA-box binding protein associated factor 5 like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031770.1 Reference Parus_major1.1 Primary Assembly

    Range
    41808730..41898393 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015622630.3 → XP_015478116.1  polypeptide N-acetylgalactosaminyltransferase 2 isoform X1

    Related
    ENSPMJP00000003098.1, ENSPMJT00000004441.1
    Conserved Domains (3) summary
    cd02510
    Location:137 → 432
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:454 → 563
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:444 → 561
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_015622631.3 → XP_015478117.1  polypeptide N-acetylgalactosaminyltransferase 2 isoform X2

    Related
    ENSPMJP00000003103.1, ENSPMJT00000004451.1
    Conserved Domains (3) summary
    cd02510
    Location:118 → 413
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:435 → 544
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:425 → 542
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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