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DSE dermatan sulfate epimerase [ Parus major (Great Tit) ]

Gene ID: 107201763, updated on 3-Aug-2024

Summary

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Gene symbol
DSE
Gene description
dermatan sulfate epimerase
See related
Ensembl:ENSPMJG00000014142
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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See DSE in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 3 NC_031770.1 (65258289..65292740, complement)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 3 NC_029270.1 (65258296..65292737, complement)

Chromosome 3 - NC_031770.1Genomic Context describing neighboring genes Neighboring gene calcium homeostasis modulator family member 4 Neighboring gene trafficking protein particle complex subunit 3L Neighboring gene calcium homeostasis modulator protein 6-like Neighboring gene calcium homeostasis modulator family member 5 Neighboring gene uncharacterized LOC117244053 Neighboring gene 5'-nucleotidase domain containing 1 Neighboring gene uncharacterized LOC117244054 Neighboring gene collagen type X alpha 1 chain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chondroitin-glucuronate 5-epimerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dermatan sulfate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dermatan-sulfate epimerase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031770.1 Reference Parus_major1.1 Primary Assembly

    Range
    65258289..65292740 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015621528.3 → XP_015477014.1  dermatan-sulfate epimerase isoform X1

  2. XM_015621527.3 → XP_015477013.1  dermatan-sulfate epimerase isoform X1

    Related
    ENSPMJP00000018852.1, ENSPMJT00000024633.1

  3. XM_015621526.3 → XP_015477012.1  dermatan-sulfate epimerase isoform X1

    Related
    ENSPMJP00000018851.1, ENSPMJT00000024632.1

  4. XM_033512828.1 → XP_033368719.1  dermatan-sulfate epimerase isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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