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SLC35A1 solute carrier family 35 member A1 [ Parus major (Great Tit) ]

Gene ID: 107201483, updated on 3-Aug-2024

Summary

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Gene symbol
SLC35A1
Gene description
solute carrier family 35 member A1
See related
Ensembl:ENSPMJG00000002615
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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See SLC35A1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 3 NC_031770.1 (78024008..78040503, complement)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 3 NC_029270.1 (78024008..78040776, complement)

Chromosome 3 - NC_031770.1Genomic Context describing neighboring genes Neighboring gene origin recognition complex subunit 3 Neighboring gene arginyl-tRNA synthetase 2, mitochondrial Neighboring gene cilia and flagella associated protein 206 Neighboring gene small integral membrane protein 8 Neighboring gene gap junction protein beta 7 Neighboring gene zinc finger protein 292

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyrimidine nucleotide-sugar transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pyrimidine nucleotide-sugar transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-sialic acid transporter

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031770.1 Reference Parus_major1.1 Primary Assembly

    Range
    78024008..78040503 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015620769.3 → XP_015476255.1  CMP-sialic acid transporter

    Related
    ENSPMJP00000002950.1, ENSPMJT00000004239.1
    Conserved Domains (2) summary
    TIGR00803
    Location:161 → 384
    nst; UDP-galactose transporter
    pfam04142
    Location:79 → 385
    Nuc_sug_transp; Nucleotide-sugar transporter
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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