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GPLD1 glycosylphosphatidylinositol specific phospholipase D1 [ Parus major (Great Tit) ]

Gene ID: 107200258, updated on 3-Aug-2024

Summary

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Gene symbol
GPLD1
Gene description
glycosylphosphatidylinositol specific phospholipase D1
See related
Ensembl:ENSPMJG00000018162
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
25
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 2 NC_031769.1 (58327426..58351046)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 2 NC_029269.1 (58327391..58351046)

Chromosome 2 - NC_031769.1Genomic Context describing neighboring genes Neighboring gene KIAA0319 ortholog Neighboring gene aldehyde dehydrogenase 5 family member A1 Neighboring gene magnesium transporter MRS2 Neighboring gene doublecortin domain containing 2 Neighboring gene neurensin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosylphosphatidylinositol phospholipase D activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor release IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol-glycan-specific phospholipase D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031769.1 Reference Parus_major1.1 Primary Assembly

    Range
    58327426..58351046
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015618489.2 → XP_015473975.1  phosphatidylinositol-glycan-specific phospholipase D isoform X1

    Related
    ENSPMJP00000024760.1, ENSPMJT00000031964.1
    Conserved Domains (3) summary
    smart00191
    Location:447 → 503
    Int_alpha; Integrin alpha (beta-propellor repeats)
    pfam00882
    Location:28 → 214
    Zn_dep_PLPC; Zinc dependent phospholipase C
    pfam01839
    Location:515 → 549
    FG-GAP; FG-GAP repeat

  2. XM_015618490.2 → XP_015473976.1  phosphatidylinositol-glycan-specific phospholipase D isoform X3

    Conserved Domains (3) summary
    smart00191
    Location:447 → 503
    Int_alpha; Integrin alpha (beta-propellor repeats)
    pfam00882
    Location:28 → 214
    Zn_dep_PLPC; Zinc dependent phospholipase C
    pfam01839
    Location:515 → 549
    FG-GAP; FG-GAP repeat

  3. XM_033512028.1 → XP_033367919.1  phosphatidylinositol-glycan-specific phospholipase D isoform X2

    Conserved Domains (3) summary
    smart00191
    Location:446 → 502
    Int_alpha; Integrin alpha (beta-propellor repeats)
    pfam00882
    Location:28 → 214
    Zn_dep_PLPC; Zinc dependent phospholipase C
    pfam01839
    Location:514 → 548
    FG-GAP; FG-GAP repeat

  4. XM_015618491.1 → XP_015473977.1  phosphatidylinositol-glycan-specific phospholipase D isoform X4

    Conserved Domains (3) summary
    smart00191
    Location:369 → 425
    Int_alpha; Integrin alpha (beta-propellor repeats)
    pfam00882
    Location:2 → 136
    Zn_dep_PLPC; Zinc dependent phospholipase C
    pfam01839
    Location:437 → 471
    FG-GAP; FG-GAP repeat

RNA

  1. XR_001519564.2 RNA Sequence

  2. XR_001519563.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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