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LPIN2 lipin 2 [ Parus major (Great Tit) ]

Gene ID: 107199837, updated on 3-Aug-2024

Summary

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Gene symbol
LPIN2
Gene description
lipin 2
See related
Ensembl:ENSPMJG00000014663
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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See LPIN2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
22
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 2 NC_031769.1 (102732063..102775558)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 2 NC_029269.1 (102732063..102775558)

Chromosome 2 - NC_031769.1Genomic Context describing neighboring genes Neighboring gene myosin regulatory light chain 2, smooth muscle minor isoform Neighboring gene myomesin 1 Neighboring gene elastin microfibril interfacer 2 Neighboring gene structural maintenance of chromosomes flexible hinge domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to insulin stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidate phosphatase LPIN2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031769.1 Reference Parus_major1.1 Primary Assembly

    Range
    102732063..102775558
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015617488.2 → XP_015472974.1  phosphatidate phosphatase LPIN2 isoform X2

    Related
    ENSPMJP00000019605.1, ENSPMJT00000025600.1
    Conserved Domains (3) summary
    pfam04571
    Location:1 → 107
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:628 → 853
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:460 → 551
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  2. XM_015617483.1 → XP_015472969.1  phosphatidate phosphatase LPIN2 isoform X1

    Related
    ENSPMJP00000019606.1, ENSPMJT00000025601.1
    Conserved Domains (4) summary
    pfam15017
    Location:899 → 919
    AF1Q; Drug resistance and apoptosis regulator
    pfam04571
    Location:33 → 138
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:660 → 885
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:492 → 582
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  3. XM_015617487.1 → XP_015472973.1  phosphatidate phosphatase LPIN2 isoform X4

    Conserved Domains (3) summary
    pfam04571
    Location:33 → 138
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:660 → 799
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:492 → 582
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  4. XM_015617486.1 → XP_015472972.1  phosphatidate phosphatase LPIN2 isoform X3

    Related
    ENSPMJP00000019607.1, ENSPMJT00000025602.1
    Conserved Domains (4) summary
    pfam15017
    Location:826 → 846
    AF1Q; Drug resistance and apoptosis regulator
    pfam04571
    Location:33 → 138
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:660 → 799
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:492 → 582
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  5. XM_033512226.1 → XP_033368117.1  phosphatidate phosphatase LPIN2 isoform X5

    Conserved Domains (3) summary
    pfam04571
    Location:33 → 139
    Lipin_N; lipin, N-terminal conserved region
    pfam16876
    Location:492 → 583
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain
    cl21460
    Location:660 → 748
    HAD_like; Haloacid Dehalogenase-like Hydrolases

  6. XM_033512225.1 → XP_033368116.1  phosphatidate phosphatase LPIN2 isoform X2

    Related
    ENSPMJP00000019608.1, ENSPMJT00000025603.1
    Conserved Domains (3) summary
    pfam04571
    Location:1 → 107
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:628 → 853
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:460 → 551
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain
Nucleotide Protein
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