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LOC107165377 zeta-sarcoglycan [ Diuraphis noxia (Russian wheat aphid) ]

Gene ID: 107165377, updated on 10-May-2024

Summary

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Gene symbol
LOC107165377
Gene description
zeta-sarcoglycan
See related
EnsemblRapid:LOC107165377
Gene type
protein coding
RefSeq status
MODEL
Organism
Diuraphis noxia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Diuraphis
Orthologs
fruit fly all
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Genomic context

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See LOC107165377 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Dnoxia_1.0 (GCF_001186385.1) Unplaced Scaffold NW_015368502.1 (260968..291962, complement)

NW_015368502.1Genomic Context describing neighboring genes Neighboring gene myosin-VIIa Neighboring gene uncharacterized LOC107165375

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015368502.1 Unplaced Scaffold Reference Dnoxia_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zeta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Diuraphis noxia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dnoxia_1.0 Primary Assembly

Genomic

  1. NW_015368502.1 Reference Dnoxia_1.0 Primary Assembly

    Range
    260968..291962 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015513576.1 → XP_015369062.1  zeta-sarcoglycan

    Related
    XP_015369062.1, XM_015513576.1
    Conserved Domains (1) summary
    pfam04790
    Location:153 → 439
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases