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Kirrel1 kirre like nephrin family adhesion molecule 1 [ Marmota marmota marmota (Alpine marmot) ]

Gene ID: 107156578, updated on 10-Oct-2024

Summary

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Gene symbol
Kirrel1
Gene description
kirre like nephrin family adhesion molecule 1
See related
Ensembl:ENSMMMG00000009653
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota marmota marmota (sub-species: marmota)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
Also known as
Kirrel
Orthologs
human mouse all
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Genomic context

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See Kirrel1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current marMar (GCF_001458135.2) Unplaced Scaffold NW_026000079.1 (300166..386751, complement)
100 previous assembly marMar2.1 (GCF_001458135.1) Unplaced Scaffold NW_015351295.1 (296975..318180, complement)

NW_026000079.1Genomic Context describing neighboring genes Neighboring gene antigen-presenting glycoprotein CD1d-like Neighboring gene small integral membrane protein 42 Neighboring gene uncharacterized LOC125620238 Neighboring gene uncharacterized LOC125620237 Neighboring gene uncharacterized LOC125620239 Neighboring gene Fc receptor-like protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1
Names
kin of IRRE like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Marmota marmota marmota Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference marMar

Genomic

  1. NW_026000079.1 Reference marMar

    Range
    300166..386751 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048814642.1 → XP_048670599.1  kin of IRRE-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0AAJ8AS99

  2. XM_048814641.1 → XP_048670598.1  kin of IRRE-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0AAJ8DI43

  3. XM_015502633.2 → XP_015358119.2  kin of IRRE-like protein 1 isoform X4

    UniProtKB/TrEMBL
    A0AAJ7F8R6

  4. XM_048814643.1 → XP_048670600.1  kin of IRRE-like protein 1 isoform X3

    UniProtKB/TrEMBL
    A0AAJ8AS30
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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