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Lman2l lectin, mannose binding 2 like [ Marmota marmota marmota (Alpine marmot) ]

Gene ID: 107154129, updated on 1-Aug-2024

Summary

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Gene symbol
Lman2l
Gene description
lectin, mannose binding 2 like
See related
Ensembl:ENSMMMG00000000187
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota marmota marmota (sub-species: marmota)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
Orthologs
human mouse all
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Genomic context

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See Lman2l in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current marMar (GCF_001458135.2) Unplaced Scaffold NW_026000020.1 (6532688..6558641)
100 previous assembly marMar2.1 (GCF_001458135.1) Unplaced Scaffold NW_015351273.1 (6532688..6557737)

NW_026000020.1Genomic Context describing neighboring genes Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 3 Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 4 Neighboring gene fer-1 like family member 5 Neighboring gene KAT8 regulatory NSL complex subunit 3 Neighboring gene AT-rich interaction domain 5A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
VIP36-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Marmota marmota marmota Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference marMar

Genomic

  1. NW_026000020.1 Reference marMar

    Range
    6532688..6558641
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015499717.2 → XP_015355203.1  VIP36-like protein isoform X2

    UniProtKB/TrEMBL
    A0A8C5YLV2
    Related
    ENSMMMP00000000222.1
    Conserved Domains (1) summary
    cl14058
    Location:50 → 298
    lectin_L-type; legume lectins

  2. XM_015499716.2 → XP_015355202.1  VIP36-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C5YI43
    Related
    ENSMMMP00000000218.1
    Conserved Domains (1) summary
    cl14058
    Location:50 → 309
    lectin_L-type; legume lectins

  3. XM_048810329.1 → XP_048666286.1  VIP36-like protein isoform X5

    UniProtKB/TrEMBL
    A0AAJ8AKP8

  4. XM_048810327.1 → XP_048666284.1  VIP36-like protein isoform X3

    UniProtKB/TrEMBL
    A0AAJ8AJT3

  5. XM_048810328.1 → XP_048666285.1  VIP36-like protein isoform X4

    UniProtKB/TrEMBL
    A0AAJ8AJH9

  6. XM_048810333.1 → XP_048666290.1  VIP36-like protein isoform X7

    UniProtKB/TrEMBL
    A0AAJ8AKQ9

  7. XM_048810330.1 → XP_048666287.1  VIP36-like protein isoform X7

    UniProtKB/TrEMBL
    A0AAJ8AKQ9

  8. XM_015499718.2 → XP_015355204.1  VIP36-like protein isoform X6

    UniProtKB/TrEMBL
    A0AAJ7F6Q6
    Conserved Domains (1) summary
    cl14058
    Location:1 → 171
    lectin_L-type; legume lectins

  9. XM_048810334.1 → XP_048666291.1  VIP36-like protein isoform X8

    UniProtKB/TrEMBL
    A0AAJ8DDQ2

  10. XM_048810331.1 → XP_048666288.1  VIP36-like protein isoform X7

    UniProtKB/TrEMBL
    A0AAJ8AKQ9

  11. XM_048810335.1 → XP_048666292.1  VIP36-like protein isoform X8

    UniProtKB/TrEMBL
    A0AAJ8DDQ2

  12. XM_048810332.1 → XP_048666289.1  VIP36-like protein isoform X7

    UniProtKB/TrEMBL
    A0AAJ8AKQ9
Nucleotide Protein
Heading Accession and Version

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