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LOC107153349 mannose-binding protein C-like [ Marmota marmota marmota (Alpine marmot) ]

Gene ID: 107153349, updated on 9-Nov-2023

Summary

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Gene symbol
LOC107153349
Gene description
mannose-binding protein C-like
See related
Ensembl:ENSMMMG00000018817
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota marmota marmota (sub-species: marmota)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
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Genomic context

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See LOC107153349 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current marMar (GCF_001458135.2) Unplaced Scaffold NW_026000000.1 (6634269..6638878, complement)
100 previous assembly marMar2.1 (GCF_001458135.1) Unplaced Scaffold NW_015351267.1 (6634567..6639854, complement)

NW_026000000.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125618035 Neighboring gene transmembrane protein 126A-like Neighboring gene uncharacterized LOC125618051 Neighboring gene uncharacterized LOC125618036 Neighboring gene membrane associated ring-CH-type finger 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in surfactant homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in rough endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannose-binding protein C-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Marmota marmota marmota Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference marMar

Genomic

  1. NW_026000000.1 Reference marMar

    Range
    6634269..6638878 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015498887.2 → XP_015354373.1  mannose-binding protein C-like

    UniProtKB/TrEMBL
    A0A8C5ZW74
    Related
    ENSMMMP00000021351.1
    Conserved Domains (1) summary
    cl02432
    Location:132 → 242
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
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