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Zbtb6 zinc finger and BTB domain containing 6 [ Marmota marmota marmota (Alpine marmot) ]

Gene ID: 107152113, updated on 14-Mar-2024

Summary

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Gene symbol
Zbtb6
Gene description
zinc finger and BTB domain containing 6
See related
Ensembl:ENSMMMG00000018466
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota marmota marmota (sub-species: marmota)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
Orthologs
human mouse all
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Genomic context

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See Zbtb6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current marMar (GCF_001458135.2) Unplaced Scaffold NW_026000051.1 (8152062..8171887)
100 previous assembly marMar2.1 (GCF_001458135.1) Unplaced Scaffold NW_015351257.1 (8165176..8169416)

NW_026000051.1Genomic Context describing neighboring genes Neighboring gene RAB GTPase activating protein 1 Neighboring gene COP9 signalosome complex subunit 2-like Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene G protein-coupled receptor 21 Neighboring gene zinc finger and BTB domain containing 26 Neighboring gene small nucleolar RNA SNORD90 Neighboring gene ring finger and CCCH-type domains 2 Neighboring gene phosducin like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Marmota marmota marmota Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference marMar

Genomic

  1. NW_026000051.1 Reference marMar

    Range
    8152062..8171887
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015497613.2 → XP_015353099.1  zinc finger and BTB domain-containing protein 6

    UniProtKB/TrEMBL
    A0A8C5ZWA3
    Related
    ENSMMMP00000020918.1
    Conserved Domains (4) summary
    sd00017
    Location:328 → 348
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:326 → 348
    zf-C2H2; Zinc finger, C2H2 type
    cd18197
    Location:8 → 123
    BTB_POZ_ZBTB6; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 6 (ZBTB6)
    pfam13465
    Location:340 → 364
    zf-H2C2_2; Zinc-finger double domain

  2. XM_048813123.1 → XP_048669080.1  zinc finger and BTB domain-containing protein 6

    UniProtKB/TrEMBL
    A0A8C5ZWA3

  3. XM_048813124.1 → XP_048669081.1  zinc finger and BTB domain-containing protein 6

    UniProtKB/TrEMBL
    A0A8C5ZWA3
Nucleotide Protein
Heading Accession and Version

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