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Ano5 anoctamin 5 [ Marmota marmota marmota (Alpine marmot) ]

Gene ID: 107135708, updated on 10-Oct-2024

Summary

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Gene symbol
Ano5
Gene description
anoctamin 5
See related
Ensembl:ENSMMMG00000006315
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota marmota marmota (sub-species: marmota)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
Orthologs
human mouse all
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Genomic context

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See Ano5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
101 current marMar (GCF_001458135.2) Unplaced Scaffold NW_026000174.1 (34374754..34483042)
100 previous assembly marMar2.1 (GCF_001458135.1) Unplaced Scaffold NW_015351213.1 (34375390..34483408)

NW_026000174.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L7-like Neighboring gene transfer RNA serine (anticodon CGA) Neighboring gene uncharacterized LOC125612084 Neighboring gene solute carrier family 17 member 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anoctamin-5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Marmota marmota marmota Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference marMar

Genomic

  1. NW_026000174.1 Reference marMar

    Range
    34374754..34483042
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015477708.2 → XP_015333194.2  anoctamin-5 isoform X1

    UniProtKB/TrEMBL
    A0AAJ7ER88

  2. XM_048788495.1 → XP_048644452.1  anoctamin-5 isoform X2

    UniProtKB/TrEMBL
    A0AAJ8CTA3

  3. XM_048788496.1 → XP_048644453.1  anoctamin-5 isoform X3

    UniProtKB/TrEMBL
    A0AAJ8CTA7

  4. XM_048788497.1 → XP_048644454.1  anoctamin-5 isoform X4

    UniProtKB/TrEMBL
    A0AAJ7ZCP1

  5. XM_048788498.1 → XP_048644455.1  anoctamin-5 isoform X5

    UniProtKB/TrEMBL
    A0AAJ7ZCN4
Nucleotide Protein
Heading Accession and Version

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