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IARS1 isoleucyl-tRNA synthetase 1 [ Gekko japonicus ]

Gene ID: 107124152, updated on 14-Mar-2024

Summary

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Gene symbol
IARS1
Gene description
isoleucyl-tRNA synthetase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Gekko japonicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Gekkonidae; Gekkoninae; Gekko
Also known as
IARS
Orthologs
human mouse all
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Genomic context

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See IARS1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
34
Annotation release Status Assembly Chr Location
100 current Gekko_japonicus_V1.1 (GCF_001447785.1) Unplaced Scaffold NW_015161415.1 (368766..494341)

NW_015161415.1Genomic Context describing neighboring genes Neighboring gene centromere protein P Neighboring gene osteoglycin Neighboring gene nucleolar protein 8 Neighboring gene plasma membrane calcium-transporting ATPase 2-like Neighboring gene sodium- and chloride-dependent GABA transporter 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015161415.1 Unplaced Scaffold Reference Gekko_japonicus_V1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aminoacyl-tRNA editing activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables isoleucine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isoleucyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: isoleucine--tRNA ligase, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gekko japonicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gekko_japonicus_V1.1 Primary Assembly

Genomic

  1. NW_015161415.1 Reference Gekko_japonicus_V1.1 Primary Assembly

    Range
    368766..494341
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015427543.1 → XP_015283029.1  LOW QUALITY PROTEIN: isoleucine--tRNA ligase, cytoplasmic

    Conserved Domains (3) summary
    cd07961
    Location:640 → 834
    Anticodon_Ia_Ile_ABEc; Anticodon-binding domain of archaeal, bacterial, and eukaryotic cytoplasmic isoleucyl tRNA synthetases
    cd00818
    Location:39 → 640
    IleRS_core; catalytic core domain of isoleucyl-tRNA synthetases
    PLN02882
    Location:5 → 1075
    PLN02882; aminoacyl-tRNA ligase
Nucleotide Protein
Heading Accession and Version

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