U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

DYSF dysferlin [ Gekko japonicus ]

Gene ID: 107105999, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
DYSF
Gene description
dysferlin
Gene type
protein coding
RefSeq status
MODEL
Organism
Gekko japonicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Gekkonidae; Gekkoninae; Gekko
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See DYSF in Genome Data Viewer
Location:
chromosome: Un
Exon count:
56
Annotation release Status Assembly Chr Location
100 current Gekko_japonicus_V1.1 (GCF_001447785.1) Unplaced Scaffold NW_015162496.1 (61648..349463)

NW_015162496.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 638-like Neighboring gene nascent polypeptide-associated complex subunit alpha, muscle-specific form-like Neighboring gene cytochrome P450 26B1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_015162496.1 Unplaced Scaffold Reference Gekko_japonicus_V1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in plasma membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
dysferlin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gekko japonicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gekko_japonicus_V1.1 Primary Assembly

Genomic

  1. NW_015162496.1 Reference Gekko_japonicus_V1.1 Primary Assembly

    Range
    61648..349463
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015406074.1 → XP_015261560.1  dysferlin

    Conserved Domains (10) summary
    cd04011
    Location:211 → 306
    C2B_Ferlin; C2 domain second repeat in Ferlin
    cd04017
    Location:1125 → 1254
    C2D_Ferlin; C2 domain fourth repeat in Ferlin
    cd04018
    Location:353 → 527
    C2C_Ferlin; C2 domain third repeat in Ferlin
    cd04037
    Location:1586 → 1707
    C2E_Ferlin; C2 domain fifth repeat in Ferlin
    cd08373
    Location:6 → 124
    C2A_Ferlin; C2 domain first repeat in Ferlin
    cd08374
    Location:1820 → 1951
    C2F_Ferlin; C2 domain sixth repeat in Ferlin
    smart00693
    Location:848 → 906
    DysFN; Dysferlin domain, N-terminal region
    pfam08150
    Location:760 → 832
    FerB; FerB (NUC096) domain
    pfam08165
    Location:671 → 728
    FerA; FerA (NUC095) domain
    pfam16165
    Location:1961 → 2048
    Ferlin_C; Ferlin C-terminus
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.