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imp3 IMP U3 small nucleolar ribonucleoprotein 3 [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107104567, updated on 14-Mar-2024

Summary

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Gene symbol
imp3
Gene description
IMP U3 small nucleolar ribonucleoprotein 3
See related
Ensembl:ENSCVAG00000019511
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Orthologs
human zebrafish all
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Genomic context

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See imp3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015152248.1 (14276..24610)

NW_015152248.1Genomic Context describing neighboring genes Neighboring gene SEC22 homolog B, vesicle trafficking protein a Neighboring gene uncharacterized protein C1orf21 homolog Neighboring gene TSEN15 tRNA splicing endonuclease subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015152248.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables snoRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Mpp10 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
U3 small nucleolar ribonucleoprotein protein IMP3
Names
IMP3, U3 small nucleolar ribonucleoprotein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015152248.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    14276..24610
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015404586.1 → XP_015260072.1  U3 small nucleolar ribonucleoprotein protein IMP3

    UniProtKB/TrEMBL
    A0A3Q2EG55
    Related
    ENSCVAP00000030744.1, ENSCVAT00000031952.1
    Conserved Domains (2) summary
    COG0522
    Location:1 → 166
    RpsD; Ribosomal protein S4 or related protein [Translation, ribosomal structure and biogenesis]
    pfam00163
    Location:5 → 57
    Ribosomal_S4; Ribosomal protein S4/S9 N-terminal domain
Nucleotide Protein
Heading Accession and Version

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