U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

sgcg sarcoglycan, gamma [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107101892, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
sgcg
Gene description
sarcoglycan, gamma
See related
Ensembl:ENSCVAG00000010088
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See sgcg in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015151621.1 (108720..132166)

NW_015151621.1Genomic Context describing neighboring genes Neighboring gene trafficking protein particle complex subunit 4 Neighboring gene ribosomal protein S25 Neighboring gene sacsin molecular chaperone Neighboring gene tumor necrosis factor receptor superfamily member 19-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_015151621.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
gamma-sarcoglycan

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015151621.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    108720..132166
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015400978.1 → XP_015256464.1  gamma-sarcoglycan isoform X2

    Conserved Domains (1) summary
    pfam04790
    Location:30 → 237
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  2. XM_015400977.1 → XP_015256463.1  gamma-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0A3Q2DZM3
    Related
    ENSCVAP00000025358.1, ENSCVAT00000001851.1
    Conserved Domains (1) summary
    pfam04790
    Location:30 → 280
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.