U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

fut9a fucosyltransferase 9a [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107096920, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
fut9a
Gene description
fucosyltransferase 9a
See related
Ensembl:ENSCVAG00000004308
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See fut9a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015151111.1 (48157..73801, complement)

NW_015151111.1Genomic Context describing neighboring genes Neighboring gene alpha-(1,3)-fucosyltransferase 9-like Neighboring gene alpha-(1,3)-fucosyltransferase 9-like Neighboring gene alpha-(1,3)-fucosyltransferase 9-like Neighboring gene mannosidase, endo-alpha Neighboring gene protein phosphatase 1 catalytic subunit beta

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_015151111.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alpha-(1,3)-fucosyltransferase 9-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015151111.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    48157..73801 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015393817.1 → XP_015249303.1  alpha-(1,3)-fucosyltransferase 9-like

    UniProtKB/TrEMBL
    A0A3Q2FH12
    Related
    ENSCVAP00000003145.1, ENSCVAT00000010524.1
    Conserved Domains (2) summary
    pfam00852
    Location:191 → 360
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:67 → 175
    Glyco_tran_10_N; Fucosyltransferase, N-terminal

  2. XM_015393821.1 → XP_015249307.1  alpha-(1,3)-fucosyltransferase 9-like

    UniProtKB/TrEMBL
    A0A3Q2FH12
    Conserved Domains (2) summary
    pfam00852
    Location:191 → 360
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:67 → 175
    Glyco_tran_10_N; Fucosyltransferase, N-terminal

  3. XM_015393818.1 → XP_015249304.1  alpha-(1,3)-fucosyltransferase 9-like

    UniProtKB/TrEMBL
    A0A3Q2FH12
    Conserved Domains (2) summary
    pfam00852
    Location:191 → 360
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:67 → 175
    Glyco_tran_10_N; Fucosyltransferase, N-terminal

  4. XM_015393819.1 → XP_015249305.1  alpha-(1,3)-fucosyltransferase 9-like

    UniProtKB/TrEMBL
    A0A3Q2FH12
    Conserved Domains (2) summary
    pfam00852
    Location:191 → 360
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:67 → 175
    Glyco_tran_10_N; Fucosyltransferase, N-terminal

  5. XM_015393820.1 → XP_015249306.1  alpha-(1,3)-fucosyltransferase 9-like

    UniProtKB/TrEMBL
    A0A3Q2FH12
    Conserved Domains (2) summary
    pfam00852
    Location:191 → 360
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:67 → 175
    Glyco_tran_10_N; Fucosyltransferase, N-terminal

  6. XM_015393825.1 → XP_015249311.1  alpha-(1,3)-fucosyltransferase 9-like

    UniProtKB/TrEMBL
    A0A3Q2FH12
    Related
    ENSCVAP00000021983.1, ENSCVAT00000010529.1
    Conserved Domains (2) summary
    pfam00852
    Location:191 → 360
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:67 → 175
    Glyco_tran_10_N; Fucosyltransferase, N-terminal

  7. XM_015393823.1 → XP_015249309.1  alpha-(1,3)-fucosyltransferase 9-like

    UniProtKB/TrEMBL
    A0A3Q2FH12
    Conserved Domains (2) summary
    pfam00852
    Location:191 → 360
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:67 → 175
    Glyco_tran_10_N; Fucosyltransferase, N-terminal

  8. XM_015393824.1 → XP_015249310.1  alpha-(1,3)-fucosyltransferase 9-like

    UniProtKB/TrEMBL
    A0A3Q2FH12
    Conserved Domains (2) summary
    pfam00852
    Location:191 → 360
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:67 → 175
    Glyco_tran_10_N; Fucosyltransferase, N-terminal
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases