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cwf19l2 CWF19 like cell cycle control factor 2 [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107093962, updated on 14-Mar-2024

Summary

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Gene symbol
cwf19l2
Gene description
CWF19 like cell cycle control factor 2
See related
Ensembl:ENSCVAG00000006942
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Orthologs
human zebrafish all
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Genomic context

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See cwf19l2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015150907.1 (380799..407014)

NW_015150907.1Genomic Context describing neighboring genes Neighboring gene sarcolipin Neighboring gene alkB homolog 8, tRNA methyltransferase Neighboring gene guanylate cyclase 1, soluble, alpha 2 Neighboring gene aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015150907.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of post-mRNA release spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CWF19-like protein 2
Names
CWF19 like 2, cell cycle control

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015150907.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    380799..407014
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015389336.1 → XP_015244822.1  CWF19-like protein 2

    UniProtKB/TrEMBL
    A0A3Q2DV43
    Related
    ENSCVAP00000023547.1, ENSCVAT00000006502.1
    Conserved Domains (3) summary
    pfam04676
    Location:823 → 917
    CwfJ_C_2; Protein similar to CwfJ C-terminus 2
    pfam06424
    Location:13 → 59
    PRP1_N; PRP1 splicing factor, N-terminal
    cl00228
    Location:691 → 814
    HIT_like; HIT family: HIT (Histidine triad) proteins, named for a motif related to the sequence HxHxH/Qxx (x, a hydrophobic amino acid), are a superfamily of nucleotide hydrolases and transferases, which act on the alpha-phosphate of ribonucleotides. On the basis ...
Nucleotide Protein
Heading Accession and Version

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