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alg9 ALG9 alpha-1,2-mannosyltransferase [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107089829, updated on 14-Mar-2024

Summary

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Gene symbol
alg9
Gene description
ALG9 alpha-1,2-mannosyltransferase
See related
Ensembl:ENSCVAG00000012997
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Orthologs
human zebrafish all
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Genomic context

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See alg9 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015150720.1 (967370..977305)

NW_015150720.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107089833 Neighboring gene ferredoxin-fold anticodon binding domain containing 1 Neighboring gene layilin a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015150720.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,2-mannosyltransferase ALG9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015150720.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    967370..977305
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015382828.1 → XP_015238314.1  alpha-1,2-mannosyltransferase ALG9

    UniProtKB/TrEMBL
    A0A3Q2CXU9, A0A3Q2GIU7
    Related
    ENSCVAP00000026970.1, ENSCVAT00000017552.1
    Conserved Domains (1) summary
    pfam03901
    Location:62 → 484
    Glyco_transf_22; Alg9-like mannosyltransferase family
Nucleotide Protein
Heading Accession and Version

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