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mmadhca metabolism of cobalamin associated Da [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107086722, updated on 14-Mar-2024

Summary

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Gene symbol
mmadhca
Gene description
metabolism of cobalamin associated Da
See related
Ensembl:ENSCVAG00000007634
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Also known as
mmadhc
Orthologs
zebrafish all
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Genomic context

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See mmadhca in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015150462.1 (2674424..2679911, complement)

NW_015150462.1Genomic Context describing neighboring genes Neighboring gene Rho GTPase activating protein 20 Neighboring gene LY6/PLAUR domain containing 6 Neighboring gene Rho family GTPase 3a Neighboring gene RNA binding motif protein 43

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015150462.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methylmalonic aciduria and homocystinuria type D protein, mitochondrial
Names
metabolism of cobalamin associated D
methylmalonic aciduria and homocystinuria, cblD type

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015150462.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    2674424..2679911 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015377851.1 → XP_015233337.1  methylmalonic aciduria and homocystinuria type D protein, mitochondrial

    UniProtKB/TrEMBL
    A0A3Q2CLF9
    Related
    ENSCVAP00000006149.1, ENSCVAT00000005483.1
    Conserved Domains (1) summary
    pfam10229
    Location:29 → 293
    DUF2246; Uncharacterized conserved protein (DUF2246)
Nucleotide Protein
Heading Accession and Version

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