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eif4e3 eukaryotic translation initiation factor 4E family member 3 [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107082362, updated on 2-Nov-2023

Summary

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Gene symbol
eif4e3
Gene description
eukaryotic translation initiation factor 4E family member 3
See related
Ensembl:ENSCVAG00000020000
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
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Genomic context

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See eif4e3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015150504.1 (1077130..1082996)

NW_015150504.1Genomic Context describing neighboring genes Neighboring gene prokineticin 2 Neighboring gene G protein-coupled receptor 27 Neighboring gene forkhead box P1b Neighboring gene uncharacterized LOC107082348

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015150504.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA 7-methylguanosine cap binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of eukaryotic translation initiation factor 4F complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 4E type 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015150504.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    1077130..1082996
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015371022.1 → XP_015226508.1  eukaryotic translation initiation factor 4E type 3

    UniProtKB/TrEMBL
    A0A3Q2EGU1
    Related
    ENSCVAP00000031019.1, ENSCVAT00000025485.1
    Conserved Domains (1) summary
    pfam01652
    Location:51 → 193
    IF4E; Eukaryotic initiation factor 4E
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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