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LOC107049991 EH domain-containing protein 2-like [ Gallus gallus (chicken) ]

Gene ID: 107049991, updated on 17-Aug-2024

Summary

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Symbol
LOC107049991provided by CGNC
Full Name
EH domain-containing protein 2-likeprovided by CGNC
Primary source
CGNC:73007
See related
Ensembl:ENSGALG00010010813
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
EHD2
Orthologs
human mouse all
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Genomic context

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See LOC107049991 in Genome Data Viewer
Location:
chromosome: 38
Exon count:
5
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 38 NC_052569.1 (229755..241641)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 38 Unlocalized Scaffold NW_024096225.1 (107592..118125, complement)

Chromosome 38 - NC_052569.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112530471 Neighboring gene NSF attachment protein alpha Neighboring gene zinc finger protein 541 Neighboring gene glioma tumor suppressor candidate region gene 1 Neighboring gene gap junction delta-2 protein-like Neighboring gene glioma tumor suppressor candidate region gene 2 Neighboring gene selenoprotein W

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EH domain-containing protein 2
Names
EH domain containing 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052569.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    229755..241641
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025144491.3 → XP_025000259.1  EH domain-containing protein 2

    UniProtKB/TrEMBL
    A0A1D5PH79
    Related
    ENSGALP00010014556.1, ENSGALT00010025863.1
    Conserved Domains (4) summary
    smart00027
    Location:437 → 530
    EH; Eps15 homology domain
    cd09913
    Location:58 → 298
    EHD; Eps15 homology domain (EHD), C-terminal domain
    pfam16880
    Location:33 → 54
    EHD_N; N-terminal EH-domain containing protein
    pfam18150
    Location:286 → 392
    DUF5600; Domain of unknown function (DUF5600)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NW_024096225.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    107592..118125 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040694936.2 → XP_040550870.1  EH domain-containing protein 2

    UniProtKB/TrEMBL
    A0A1D5PH79
    Conserved Domains (4) summary
    smart00027
    Location:437 → 530
    EH; Eps15 homology domain
    cd09913
    Location:58 → 298
    EHD; Eps15 homology domain (EHD), C-terminal domain
    pfam16880
    Location:33 → 54
    EHD_N; N-terminal EH-domain containing protein
    pfam18150
    Location:286 → 392
    DUF5600; Domain of unknown function (DUF5600)
Nucleotide Protein
Heading Accession and Version

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