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LOC107031147 pyruvate kinase isozyme A, chloroplastic [ Solanum pennellii ]

Gene ID: 107031147, updated on 21-Dec-2023

Summary

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Gene symbol
LOC107031147
Gene description
pyruvate kinase isozyme A, chloroplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum pennellii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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Genomic context

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See LOC107031147 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
7
Annotation release Status Assembly Chr Location
101 current SPENNV200 (GCF_001406875.1) 9 NC_028645.1 (80191488..80201180)

Chromosome 9 - NC_028645.1Genomic Context describing neighboring genes Neighboring gene guanine nucleotide-binding protein subunit gamma 1 Neighboring gene protein SRC2 homolog Neighboring gene uncharacterized LOC107031432 Neighboring gene GDP-mannose 3,5-epimerase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_028645.1 Chromosome 9 Reference SPENNV200

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables potassium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyruvate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast stroma IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pyruvate kinase isozyme A, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum pennellii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SPENNV200

Genomic

  1. NC_028645.1 Reference SPENNV200

    Range
    80191488..80201180
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027919435.1 → XP_027775236.1  pyruvate kinase isozyme A, chloroplastic isoform X2

  2. XM_015232389.2 → XP_015087875.1  pyruvate kinase isozyme A, chloroplastic isoform X1

    Conserved Domains (2) summary
    PLN02762
    Location:95 → 593
    PLN02762; pyruvate kinase complex alpha subunit
    cl23794
    Location:114 → 581
    Pyruvate_Kinase; Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors. Like other allosteric enzymes, PK has a high substrate affinity R state and a low ...
Nucleotide Protein
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