U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC107022024 cullin-1-like [ Solanum pennellii ]

Gene ID: 107022024, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC107022024
Gene description
cullin-1-like
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Solanum pennellii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 6
Exon count:
20
Annotation release Status Assembly Chr Location
101 current SPENNV200 (GCF_001406875.1) 6 NC_028642.1 (2885439..2892624)

Chromosome 6 - NC_028642.1Genomic Context describing neighboring genes Neighboring gene F-box/kelch-repeat protein SKIP30-like Neighboring gene tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 Neighboring gene uncharacterized LOC107022055 Neighboring gene uncharacterized LOC107022011

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_028642.1 Chromosome 6 Reference SPENNV200

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A pollen factor linking inter- and intraspecific pollen rejection in tomato. Li W, et al. Science, 2010 Dec 24. PMID 21205670
  2. Fine mapping of ui6.1, a gametophytic factor controlling pollen-side unilateral incompatibility in interspecific solanum hybrids. Li W, et al. Genetics, 2010 Jul. PMID 20439771, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cullin-RING ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cullin-1-like
Names
cullin 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001323441.1 → NP_001310370.1  cullin-1-like

    Status: PROVISIONAL

    Source sequence(s)
    HQ610201
    UniProtKB/TrEMBL
    E9NAZ9
    Conserved Domains (3) summary
    smart00182
    Location:424 → 565
    CULLIN; Cullin
    pfam00888
    Location:34 → 642
    Cullin; Cullin family
    pfam10557
    Location:672 → 732
    Cullin_Nedd8; Cullin protein neddylation domain

RefSeqs of Annotated Genomes: Solanum pennellii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SPENNV200

Genomic

  1. NC_028642.1 Reference SPENNV200

    Range
    2885439..2892624
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases