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LOC107008173 scopoletin glucosyltransferase-like [ Solanum pennellii ]

Gene ID: 107008173, updated on 21-Dec-2023

Summary

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Gene symbol
LOC107008173
Gene description
scopoletin glucosyltransferase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum pennellii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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Genomic context

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See LOC107008173 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
101 current SPENNV200 (GCF_001406875.1) 1 NC_028637.1 (105935699..105937585, complement)

Chromosome 1 - NC_028637.1Genomic Context describing neighboring genes Neighboring gene scopoletin glucosyltransferase-like Neighboring gene scopoletin glucosyltransferase-like Neighboring gene scopoletin glucosyltransferase-like Neighboring gene CBS domain-containing protein CBSX1, chloroplastic-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_028637.1 Chromosome 1 Reference SPENNV200

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
scopoletin glucosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum pennellii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SPENNV200

Genomic

  1. NC_028637.1 Reference SPENNV200

    Range
    105935699..105937585 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015207099.2 → XP_015062585.1  scopoletin glucosyltransferase-like

    Conserved Domains (2) summary
    TIGR01426
    Location:43 → 478
    MGT; glycosyltransferase, MGT family
    cl10013
    Location:33 → 491
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
Nucleotide Protein
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