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LOC107002219 mitochondrial carnitine/acylcarnitine carrier-like protein [ Solanum pennellii ]

Gene ID: 107002219, updated on 21-Dec-2023

Summary

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Gene symbol
LOC107002219
Gene description
mitochondrial carnitine/acylcarnitine carrier-like protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum pennellii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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Genomic context

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See LOC107002219 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
4
Annotation release Status Assembly Chr Location
101 current SPENNV200 (GCF_001406875.1) 10 NC_028646.1 (77588609..77592440, complement)

Chromosome 10 - NC_028646.1Genomic Context describing neighboring genes Neighboring gene probable protein phosphatase 2C 55 Neighboring gene zinc finger CCCH domain-containing protein 49-like Neighboring gene glycosyltransferase-like At2g41451 Neighboring gene UPF0481 protein At3g47200-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_028646.1 Chromosome 10 Reference SPENNV200

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum pennellii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SPENNV200

Genomic

  1. NC_028646.1 Reference SPENNV200

    Range
    77588609..77592440 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015200153.2 → XP_015055639.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    Conserved Domains (1) summary
    pfam00153
    Location:211 → 297
    Mito_carr; Mitochondrial carrier protein

  2. XM_015200152.2 → XP_015055638.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    Conserved Domains (1) summary
    pfam00153
    Location:211 → 297
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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