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PKD1 polycystin 1, transient receptor potential channel interacting [ Acinonyx jubatus (cheetah) ]

Gene ID: 106982747, updated on 13-Mar-2024

Summary

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Gene symbol
PKD1
Gene description
polycystin 1, transient receptor potential channel interacting
Gene type
protein coding
RefSeq status
MODEL
Organism
Acinonyx jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Acinonychinae; Acinonyx
Orthologs
human mouse all
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Genomic context

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See PKD1 in Genome Data Viewer
Location:
chromosome: E3
Exon count:
46
Annotation release Status Assembly Chr Location
RS_2023_04 current VMU_Ajub_asm_v1.0 (GCF_027475565.1) E3 NC_069398.1 (38125306..38169422, complement)

Chromosome E3 - NC_069398.1Genomic Context describing neighboring genes Neighboring gene NHERF family PDZ scaffold protein 2 Neighboring gene nth like DNA glycosylase 1 Neighboring gene TSC complex subunit 2 Neighboring gene uncharacterized LOC106978764 Neighboring gene small nucleolar RNA SNORD60 Neighboring gene RAB26, member RAS oncogene family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069398.1 Chromosome E3 Reference VMU_Ajub_asm_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in kidney development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polycystin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027475565.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VMU_Ajub_asm_v1.0

Genomic

  1. NC_069398.1 Reference VMU_Ajub_asm_v1.0

    Range
    38125306..38169422 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053213242.1 → XP_053069217.1  polycystin-1 isoform X1

  2. XM_027042958.2 → XP_026898759.2  polycystin-1 isoform X2

  3. XM_053213243.1 → XP_053069218.1  polycystin-1 isoform X3

  4. XM_053213244.1 → XP_053069219.1  polycystin-1 isoform X4

Nucleotide Protein
Heading Accession and Version

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