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COLEC10 collectin subfamily member 10 [ Acinonyx jubatus (cheetah) ]

Gene ID: 106975519, updated on 13-Mar-2024

Summary

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Gene symbol
COLEC10
Gene description
collectin subfamily member 10
Gene type
protein coding
RefSeq status
MODEL
Organism
Acinonyx jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Acinonychinae; Acinonyx
Orthologs
human mouse all
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Genomic context

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See COLEC10 in Genome Data Viewer
Location:
chromosome: F2
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_04 current VMU_Ajub_asm_v1.0 (GCF_027475565.1) F2 NC_069394.1 (20257128..20296094, complement)

Chromosome F2 - NC_069394.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113600472 Neighboring gene mal, T cell differentiation protein 2 Neighboring gene uncharacterized LOC113600592 Neighboring gene U6 spliceosomal RNA Neighboring gene TNF receptor superfamily member 11b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069394.1 Chromosome F2 Reference VMU_Ajub_asm_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
collectin-10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027475565.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VMU_Ajub_asm_v1.0

Genomic

  1. NC_069394.1 Reference VMU_Ajub_asm_v1.0

    Range
    20257128..20296094 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053208259.1 → XP_053064234.1  collectin-10 isoform X2

  2. XM_015072845.3 → XP_014928331.1  collectin-10 isoform X1

    UniProtKB/TrEMBL
    A0A6I9ZUN0
    Conserved Domains (2) summary
    cd03591
    Location:157 → 272
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
    pfam01391
    Location:45 → 93
    Collagen; Collagen triple helix repeat (20 copies)
Nucleotide Protein
Heading Accession and Version

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