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MYF5 myogenic factor 5 [ Acinonyx jubatus (cheetah) ]

Gene ID: 106967437, updated on 13-Mar-2024

Summary

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Gene symbol
MYF5
Gene description
myogenic factor 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Acinonyx jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Acinonychinae; Acinonyx
Orthologs
human mouse all
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Genomic context

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See MYF5 in Genome Data Viewer
Location:
chromosome: B4
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_04 current VMU_Ajub_asm_v1.0 (GCF_027475565.1) B4 NC_069387.1 (101848589..101851774)

Chromosome B4 - NC_069387.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type Q Neighboring gene U6 spliceosomal RNA Neighboring gene myogenic factor 6 Neighboring gene lin-7 homolog A, crumbs cell polarity complex component Neighboring gene KATNB1-like protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069387.1 Chromosome B4 Reference VMU_Ajub_asm_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in muscle organ development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of myoblast differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myogenic factor 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027475565.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VMU_Ajub_asm_v1.0

Genomic

  1. NC_069387.1 Reference VMU_Ajub_asm_v1.0

    Range
    101848589..101851774
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015063677.3 → XP_014919163.2  myogenic factor 5

    UniProtKB/TrEMBL
    A0A6I9ZIC2
    Conserved Domains (3) summary
    smart00520
    Location:1 → 88
    BASIC; Basic domain in HLH proteins of MYOD family
    pfam00010
    Location:84 → 135
    HLH; Helix-loop-helix DNA-binding domain
    pfam12232
    Location:143 → 214
    Myf5; Myogenic determination factor 5
Nucleotide Protein
Heading Accession and Version

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